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dcm2nii

xvr.cli.commands.dcm2nii

dcm2nii 

dcm2nii(inpath, outpath)

Convert a DICOMDIR to a NIfTI file.

Source code in src/xvr/cli/commands/dcm2nii.py 
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@click.command(cls=CategorizedCommand)
@click.argument("inpath", type=click.Path(exists=True))
@click.argument("outpath", type=click.Path())
def dcm2nii(inpath, outpath):
    """Convert a DICOMDIR to a NIfTI file."""

    from torchio import ScalarImage

    click.echo(f"Converting {inpath} to {outpath}")

    volume = ScalarImage(inpath)
    volume.save(outpath)